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Buffalo, Vince,

Bioinformatics data skills / Bioinformatics data skills : reproducible and robust research with open source tools. Vince Buffalo. - First edition. - xxv, 507 pages : illustrations ; 24 cm.

Includes bibliographical references (pages 479-482) and index.

Ideology : data skills for robust and reproducible bioinformatics. How to learn bioinformatics -- Prerequisites : essential skills for getting started with a bioinformatics project. Setting up and managing a bioinformatics project -- Remedial Unix shell -- Working with remote machines -- Git for scientists -- Bioinformatics data -- Practice : bioinformatics data skills. Unix data tools -- A rapid introduction to the R language -- Working with range data -- Working with sequence data -- Working with alignment data -- Bioinformatics shell scripting, writing pipelines, and parallelizing tasks -- Out-of-memory approaches : Tabix and SGLite.

ISBN: 1449367372 9781449367374

Subjects--Topical Terms:
Bioinformatics.
Big data.
Database management.
Biology--Data processing.
Information science.
Computational Biology.
Database Management Systems.
Biology.
Automatic Data Processing.
Information Science.

LC Class. No.: QH324.2 / .B84 2015 QH324.2 / .B84 2015